This paper addresses the faculty perception on web-based instruction in order to explain the nature of learning and instruction in this setting. Using a mixed method approach, the research studied a sample of 132 University Faculty (lecturers and professors) in University of Kurdistan. The research tools were interview and questionnaire. The results of Exploratory Factor Analysis suggested that five basic components could explain the nature of learning and instruction of web-based instruction in higher education: the lack of authentic learning, autonomy in learning tasks, the weakness of faculty role in instruction, technical skills in web-based instruction and infrastructure and policy-making. These five components could explicate two more fundamental themes: the overall nature of learning and teaching in web-based instruction and web-based obstacles.