摘要:PTTRNFNDR is an unsupervised statistical learning algorithm that detects patterns in DNA sequences, proteinsequences, or any natural language texts that can be decomposed into letters of a finite alphabet. PTTRNFNDRperforms complex mathematical computations, and its processing time increases when input texts become large. Toachieve better speed performance, several strategies were applied in the implementation of the program, includingparallel operations of binary search trees. A standard binary search tree is not thread-safe due to its dynamic insertionsand deletions. Here, we adjusted the standard binary search tree for parallelized operations to achieve improvedperformance of the PTTRNFNDR algorithm. The method can be applied to other software platforms to quicken datasearching through parallel operations of binary search trees when several conditions are met.
关键词:Computational speed; Data structure; Parallel processing.