文章基本信息

标题：Alteration of the Relative Stability of dA·dT and dG·dC Base Pairs in DNA
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作者：William B. Melchior ; Peter H. Von Hippel
期刊名称：Proceedings of the National Academy of Sciences
印刷版ISSN：0027-8424
电子版ISSN：1091-6490
出版年度：1973
卷号：70
期号：2
页码：298-302
DOI：10.1073/pnas.70.2.298
语种：English
出版社：The National Academy of Sciences of the United States of America
摘要：Several small alkylammonium ions can eliminate, or even reverse, the usual dependence of the DNA transition temperature on base composition. For example, in 3 M tetramethylammonium chloride, or 2.4 M tetraethylammonium chloride, DNAs of different base compositions all melt at a common temperature, and with a greatly decreased breadth of transition reflecting only the sequence-independent components of melting cooperativity. At still higher concentrations of such additives, dG{middle dot}dC-rich DNAs melt at lower temperatures than dA{middle dot}dT-rich molecules. Circular dichroism spectra show that these additives alter the structure of the DNA double helix very little at room temperature. This differential (base-specific) effect on helix stability is investigated with several small additives related to the tetraalkylammonium ions. Additives larger than tetraethylammonium ion have little differential effect on helix stability. Preferential binding of ions to dA{middle dot}dT base pairs, requiring fit into a "groove" of DNA, is consistent with these data and with equilibrium binding studies. These differential effects can be distinguished from general destabilizing effects, which are independent of specific features of macromolecular conformation or chemistry. Possible experimental uses of this ability to alter the base-composition-dependent components of the stability of the DNA helix are discussed, as well as the insight this phenomenon provides into the molecular basis for the differential stability of dA{middle dot}dT and dG{middle dot}dC base pairs.
关键词：solvent additives ; tetraalkylammonium ions ; melting transitions ; circular dichroism ; cooperativity