文章基本信息

标题：Toward richer metadata for microbial sequences: replacing strain-level NCBI taxonomy taxids with BioProject, BioSample and Assembly records
本地全文：下载
作者：Scott Federhen ; Karen Clark ; Tanya Barrett 等
期刊名称：Environmental Microbiome
印刷版ISSN：2524-6372
出版年度：2014
卷号：9
期号：3
页码：1275-1277
DOI：10.4056/sigs.4851102
摘要：Microbial genome sequence submissions to the International Nucleotide Sequence Database Collaboration (INSDC) have been annotated with organism names that include the strain identifier. Each of these strain-level names has been assigned a unique ‘taxid’ in the NCBI Taxonomy Database. With the significant growth in genome sequencing, it is not possible to continue with the curation of strain-level taxids. In January 2014, NCBI will cease assigning strain-level taxids. Instead, submitters are encouraged provide strain information and rich metadata with their submission to the sequence database, BioProject and BioSample.
关键词：Haemophilus Influenzae;Microbial Genome;Taxonomy Group;NCBI Taxonomy;Genomic Standard Consortium