文章基本信息

标题：Assessing aneuploidy with repetitive element sequencing
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作者：Christopher Douville ; Joshua D. Cohen ; Janine Ptak 等
期刊名称：Proceedings of the National Academy of Sciences
印刷版ISSN：0027-8424
电子版ISSN：1091-6490
出版年度：2020
卷号：117
期号：9
页码：4858-4863
DOI：10.1073/pnas.1910041117
出版社：The National Academy of Sciences of the United States of America
摘要：We report a sensitive PCR-based assay called Repetitive Element AneupLoidy Sequencing System (RealSeqS) that can detect aneuploidy in samples containing as little as 3 pg of DNA. Using a single primer pair, we amplified ∼350,000 amplicons distributed throughout the genome. Aneuploidy was detected in 49% of liquid biopsies from a total of 883 nonmetastatic, clinically detected cancers of the colorectum, esophagus, liver, lung, ovary, pancreas, breast, or stomach. Combining aneuploidy with somatic mutation detection and eight standard protein biomarkers yielded a median sensitivity of 80% in these eight cancer types, while only 1% of 812 healthy controls scored positive.
关键词：liquid biopsy ; aneuploidy ; early cancer detection ; circulating tumor DNA