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标题：Large-scale identification and functional analysis of NLR genes in blast resistance in the Tetep rice genome sequence
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作者：Long Wang ; Long Wang ; Lina Zhao 等
期刊名称：Proceedings of the National Academy of Sciences
印刷版ISSN：0027-8424
电子版ISSN：1091-6490
出版年度：2019
卷号：116
期号：37
页码：18479-18487
DOI：10.1073/pnas.1910229116
出版社：The National Academy of Sciences of the United States of America
摘要：Tetep is a rice cultivar known for broad-spectrum resistance to blast, a devastating fungal disease. The molecular basis for its broad-spectrum resistance is still poorly understood. Is it because Tetep has many more NLR genes than other cultivars? Or does Tetep possess multiple major NLR genes that can individually confer broad-spectrum resistance to blast? Moreover, are there many interacting NLR pairs in the Tetep genome? We sequenced its genome, obtained a high-quality assembly, and annotated 455 nucleotide-binding site leucine-rich repeat ( NLR ) genes. We cloned and tested 219 NLR genes as transgenes in 2 susceptible cultivars using 5 to 12 diversified pathogen strains; in many cases, fewer than 12 strains were successfully cultured for testing. Ninety cloned NLR s showed resistance to 1 or more pathogen strains and each strain was recognized by multiple NLR s. However, few NLR s showed resistance to >6 strains, so multiple NLR s are apparently required for Tetep’s broad-spectrum resistance to blast. This was further supported by the pedigree analyses, which suggested a correlation between resistance and the number of Tetep-derived NLR s. In developing a method to identify NLR pairs each of which functions as a unit, we found that >20% of the NLR s in the Tetep and 3 other rice genomes are paired. Finally, we designed an extensive set of molecular markers for rapidly introducing clustered and paired NLR s in the Tetep genome for breeding new resistant cultivars. This study increased our understanding of the genetic basis of broad-spectrum blast resistance in rice..
关键词：Oryza sativa ; NBS;LRR gene ; blast resistance ; R ;gene cloning ; NLR network