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  • 标题:All-atom simulations disentangle the functional dynamics underlying gene maturation in the intron lariat spliceosome
  • 作者:Lorenzo Casalino ; Giulia Palermo ; Angelo Spinello
  • 期刊名称:Proceedings of the National Academy of Sciences
  • 印刷版ISSN:0027-8424
  • 电子版ISSN:1091-6490
  • 出版年度:2018
  • 卷号:115
  • 期号:26
  • 页码:6584-6589
  • DOI:10.1073/pnas.1802963115
  • 语种:English
  • 出版社:The National Academy of Sciences of the United States of America
  • 摘要:The spliceosome (SPL) is a majestic macromolecular machinery composed of five small nuclear RNAs and hundreds of proteins. SPL removes noncoding introns from precursor messenger RNAs (pre-mRNAs) and ligates coding exons, giving rise to functional mRNAs. Building on the first SPL structure solved at near–atomic-level resolution, here we elucidate the functional dynamics of the intron lariat spliceosome (ILS) complex through multi-microsecond-long molecular-dynamics simulations of ∼1,000,000 atoms models. The ILS essential dynamics unveils ( i ) the leading role of the Spp42 protein, which heads the gene maturation by tuning the motions of distinct SPL components, and ( ii ) the critical participation of the Cwf19 protein in displacing the intron lariat/U2 branch helix. These findings provide unprecedented details on the SPL functional dynamics, thus contributing to move a step forward toward a thorough understanding of eukaryotic pre-mRNA splicing.
  • 关键词:spliceosome ; splicing ; molecular dynamics ; RNA ; gene maturation
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