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  • 标题:Structure of the EmrE multidrug transporter and its use for inhibitor peptide design
  • 作者:Victor Ovchinnikov ; Tracy A. Stone ; Charles M. Deber
  • 期刊名称:Proceedings of the National Academy of Sciences
  • 印刷版ISSN:0027-8424
  • 电子版ISSN:1091-6490
  • 出版年度:2018
  • 卷号:115
  • 期号:34
  • 页码:E7932-E7941
  • DOI:10.1073/pnas.1802177115
  • 语种:English
  • 出版社:The National Academy of Sciences of the United States of America
  • 摘要:Small multidrug resistance (SMR) pumps represent a minimal paradigm of proton-coupled membrane transport in bacteria, yet no high-resolution structure of an SMR protein is available. Here, atomic-resolution structures of the Escherichia coli efflux-multidrug resistance E ( EmrE ) multidrug transporter in ligand-bound form are refined using microsecond molecular dynamics simulations biased using low-resolution data from X-ray crystallography. The structures are compatible with existing mutagenesis data as well as NMR and biochemical experiments, including pKas of the catalytic glutamate residues and the dissociation constant (
  • 关键词:drug resistance ; molecular dynamics ; membrane proteins ; structure refinement ; stapled peptides
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