摘要:ABSTRACT Understanding the environmental factors that control community structure has become a major focus of ecological research in recent decades. Here, we aimed to analyze the structure of planktonic testate amoebae community and the impact of environmental variables on the diversity of planktonic species in four floodplains of Brazil (Amazonian, Araguaia, Paraná, and Pantanal) over two hydrological periods (2011 and 2012). We hypothesized that biological diversity (richness, abundance, and diversity) of the testate amoebae community is higher during drought periods. Samples were collected from the subsurface of the limnetic region of 72 lakes in the four floodplains during both drought and flood periods in both years. We identified 109 species, belonging to 11 families. Difflugiidae and Arcellidae exhibited higher species composition and abundance. ANOVA results showed noticeable temporal variation in testate amoebae community structure. We confirmed that the highest richness, abundance, and diversity were primarily recorded during drought periods, with significant differences being documented among floodplains and across the two hydrological periods. Multiple regression analysis also indicated that testate amoebae diversity is related to the productivity of the environments in the Amazonian, Araguaia, and Paraná floodplains. Depth of lakes and phosphorus appeared to be limiting factors in the Paraná and Araguaia floodplains, while dissolved oxygen limited species diversity in the Pantanal floodplain. Our results highlight that testate amoebae community exhibit the greatest biological diversity during drought periods, while species diversity is influenced by the environmental conditions (primarily productivity) of each floodplain.