文章基本信息

标题：RNA signatures allow rapid identification of pathogens and antibiotic susceptibilities
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作者：Amy K. Barczak ; James E. Gomez ; Benjamin B. Kaufmann 等
期刊名称：Proceedings of the National Academy of Sciences
印刷版ISSN：0027-8424
电子版ISSN：1091-6490
出版年度：2012
卷号：109
期号：16
页码：6217-6222
DOI：10.1073/pnas.1119540109
语种：English
出版社：The National Academy of Sciences of the United States of America
摘要：With rising rates of drug-resistant infections, there is a need for diagnostic methods that rapidly can detect the presence of pathogens and reveal their susceptibility to antibiotics. Here we propose an approach to diagnosing the presence and drug-susceptibility of infectious diseases based on direct detection of RNA from clinical samples. We demonstrate that species-specific RNA signatures can be used to identify a broad spectrum of infectious agents, including bacteria, viruses, yeast, and parasites. Moreover, we show that the behavior of a small set of bacterial transcripts after a brief antibiotic pulse can rapidly differentiate drug-susceptible and -resistant organisms and that these measurements can be made directly from clinical materials. Thus, transcriptional signatures could form the basis of a uniform diagnostic platform applicable across a broad range of infectious agents.
关键词：antibiotic resistance ; genomics ; tuberculosis