文章基本信息

标题：Thermodynamic equilibrium between blue and green copper sites and the role of the protein in controlling function
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作者：Somdatta Ghosh ; Xiangjin Xie ; Abhishek Dey 等
期刊名称：Proceedings of the National Academy of Sciences
印刷版ISSN：0027-8424
电子版ISSN：1091-6490
出版年度：2009
卷号：106
期号：13
页码：4969-4974
DOI：10.1073/pnas.0900995106
语种：English
出版社：The National Academy of Sciences of the United States of America
摘要：A combination of spectroscopies and density functional theory calculations indicate that there are large temperature-dependent absorption spectral changes present in green nitrite reductases (NiRs) due to a thermodynamic equilibrium between a green and a blue type 1 (T1) copper site. The axial methionine (Met) ligand is unconstrained in the oxidized NiRs, which results in an enthalpically favored ({Delta}H {approx}4.6 kcal/mol) Met-bound green copper site at low temperatures, and an entropically favored (T{Delta}S {approx}4.5 kcal/mol, at room temperature) Met-elongated blue copper site at elevated temperatures. In contrast to the NiRs, the classic blue copper sites in plastocyanin and azurin show no temperature-dependent behavior, indicating that a single species is present at all temperatures. For these blue copper proteins, the polypeptide matrix opposes the gain in entropy that would be associated with the loss of the weak axial Met ligand at physiological temperatures by constraining its coordination to copper. The potential energy surfaces of Met binding indicate that it stabilizes the oxidized state more than the reduced state. This provides a mechanism to tune down the reduction potential of blue copper sites by >200 mV.
关键词：electron transfer ; reduction potential ; thermodynamics ; DFT calculation ; spectroscopy