文章基本信息

标题：Real-time multidimensional NMR follows RNA folding with second resolution
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作者：Mi-Kyung Lee ; Maayan Gal ; Lucio Frydman 等
期刊名称：Proceedings of the National Academy of Sciences
印刷版ISSN：0027-8424
电子版ISSN：1091-6490
出版年度：2010
卷号：107
期号：20
页码：9192-9197
DOI：10.1073/pnas.1001195107
语种：English
出版社：The National Academy of Sciences of the United States of America
摘要：Conformational transitions and structural rearrangements are central to the function of many RNAs yet remain poorly understood. We have used ultrafast multidimensional NMR techniques to monitor the adenine-induced folding of an adenine-sensing riboswitch in real time, with nucleotide-resolved resolution. By following changes in 2D spectra at rates of approximately 0.5 Hz, we identify distinct steps associated with the ligand-induced folding of the riboswitch. Following recognition of the ligand, long range loop-loop interactions form and are then progressively stabilized before the formation of a fully stable complex over approximately 2-3 minutes. The application of these ultrafast multidimensional NMR methods provides the opportunity to determine the structure of RNA folding intermediates and conformational trajectories.
关键词：dynamics ; riboswitches ; ultrafast NMR ; conformational transition