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  • 标题:R loops stimulate genetic instability of CTG·CAG repeats
  • 本地全文:下载
  • 作者:Yunfu Lin ; Sharon Y. R. Dent ; John H. Wilson
  • 期刊名称:Proceedings of the National Academy of Sciences
  • 印刷版ISSN:0027-8424
  • 电子版ISSN:1091-6490
  • 出版年度:2010
  • 卷号:107
  • 期号:2
  • 页码:692-697
  • DOI:10.1073/pnas.0909740107
  • 语种:English
  • 出版社:The National Academy of Sciences of the United States of America
  • 摘要:Transcription stimulates the genetic instability of trinucleotide repeat sequences. However, the mechanisms leading to transcription-dependent repeat length variation are unclear. We demonstrate, using biochemical and genetic approaches, that the formation of stable RNA{middle dot}DNA hybrids enhances the instability of CTG{middle dot}CAG repeat tracts. In vitro transcribed CG-rich repeating sequences, unlike AT-rich repeats and nonrepeating sequences, form stable, ribonuclease A-resistant structures. These RNA{middle dot}DNA hybrids are eliminated by ribonuclease H treatment. Mutation in the rnhA1 gene that decreases the activity of ribonuclease HI stimulates the instability of CTG{middle dot}CAG repeats in E. coli. Importantly, the effect of ribonuclease HI depletion on repeat instability requires active transcription. We also showed that transcription-dependent CTG{middle dot}CAG repeat instability in human cells is stimulated by siRNA knockdown of RNase H1 and H2. In addition, we used bisulfite modification, which detects single-stranded DNA, to demonstrate that the nontemplate DNA strand at transcribed CTG{middle dot}CAG repeats remains partially single-stranded in human genomic DNA, thus indicating that it is displaced by an RNA{middle dot}DNA hybrid. These studies demonstrate that persistent hybrids between the nascent RNA transcript and the template DNA strand at CTG{middle dot}CAG tracts promote instability of DNA trinucleotide repeats.
  • 关键词:RNA·DNA hybrids ; transcription-induced instability ; triplet repeats
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