文章基本信息

标题：African Arowana Genome Provides Insights on Ancient Teleost Evolution
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作者：Shijie Hao ; Kai Han ; Lingfeng Meng 等
期刊名称：iScience
印刷版ISSN：2589-0042
出版年度：2020
卷号：23
期号：11
页码：1-36
DOI：10.1016/j.isci.2020.101662
语种：English
出版社：Elsevier
摘要：SummaryOsteoglossiformesis a basal clade of teleost, evolving since the Jurassic period. The genomes ofOsteoglossiformesspecies would shed light on the evolution and adaptation of teleost. Here, we established a chromosome-level genome of African arowana. Together with the genomes of pirarucu and Asian arowana, we found that they diverged at ∼106.1 million years ago (MYA) and ∼59.2 MYA, respectively, which are coincident with continental separation. Interestingly, we identified a dynamic genome evolution characterized by a fast evolutionary rate and a high pseudogenization rate in African arowana and pirarucu. Additionally, more transposable elements were found in Asian arowana which confer more gene duplications. Moreover, we found the contraction of olfactory receptor and the expansion of UGT in African arowana might be related to its transformation from carnivore to be omnivore. Taken together, we provided valuable genomic resource ofOsteoglossidaeand revealed the correlation of biogeography and teleost evolution.Graphical AbstractDisplay OmittedHighlights•An evolutionary model ofOsteoglossidaealong the continental drift is provided•A faster evolving rate of African arowana than Asian arowana is revealed•The gene duplications of Asian arowana are related to more class I TE insertions•A mechanism of African arowana’s feeding habits transition is proposed.Evolutionary Biology; Phylogenetics; Paleobiology; Paleogenetics